2024 Maize single cell

Maize single cell

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August undefined, 2024

WebApr 26, 2024 · We have developed a planta platform of single-nucleus RNA-sequencing by combined fluorescence-activated nuclei flow sorting, and used it to identify cell types in … WebDec 3, 2024 · Here, we used single-cell RNA sequencing to rapidly generate a cell-resolution map of the maize root, revealing an alternative configuration of the tissue formative transcription factor SHORT-ROOT (SHR) adjacent to an expanded cortex. We show that maize SHR protein is hypermobile, moving at least eight cell layers into the …

A cis-regulatory atlas in maize at single-cell resolution

WebXu et al. construct and validate a single-cell transcriptomic atlas of developing maize ears. Their single-cell gene co-expression networks will facilitate developmental genetics studies by predicting genetic redundancy and revealing transcriptional regulatory networks. Their results also inform maize breeding by identifying candidate trait-associated genes. WebFeb 20, 2024 · Background: Maize mesophyll (M) cells play important roles in various biological processes such as photosynthesis II and secondary metabolism. Functional … free online horse courses uk

Plant stem-cell organization and differentiation at single-cell ...

WebFeb 4, 2024 · Single-cell RNA sequencing (scRNA-seq) technology has recently been used to examine the cellular identity and heterogeneity of several complex plant tissues in … WebMay 4, 2024 · Recently, single-cell RNA-seq (scRNA-seq) studies have addressed the specification of tissues from stem cells in the primary root. scRNA-seq studies are anticipated to be a useful approach to decipher cell fate specification and patterning during LR formation. ... Evidence for phloem loading via the abaxial bundle sheath cells in … WebFurthermore, various single-cell omics studies have highlighted the importance of epigenomic regulation in processes such as cell immune responses in human T cells (Satpathy et al., 2024) and cell differentiation in maize (Zea mays) (Satterlee et al., 2024). The same techniques should also provide new dimensions to genome regulation … farm direct marketing

Barbara McClintock and the Discovery of Jumping Genes ... - Nature

Weblation of living plant stem cells enabled this single-cell tran-scriptomic analysis of a plant vegetative shoot meristem. Two zones of cell identity are identified within the maize SAM: 1) a slowly dividing stem-cell domain at the SAM tip expressing genes with functions in genome integrity, and 2) a subtending pop- WebOct 23, 2024 · To identify CREs underlying the specification of different organs in the crop species Zea mays (maize), Marand and colleagues improved a protocol for single-cell sequencing of Assay for Transposase Accessible Chromatin (scATAC-seq). farm dining tables with benchesWebFeb 22, 2024 · To generate a single-cell atlas from developing maize ears, we used the 5–10 mm stage, where major developmental and architectural decisions, including … free online horror stories

"WebOct 23, 2024 · Single-cell sequencing technology emerged recently, enabling high-throughput analyses of the cell lineage trees of higher organisms 20. In plants, single … " - Maize single cell

Maize single cell

Single-cell RNA sequencing of developing maize ears facilitates ...

WebMar 22, 2024 · More information: Xuhui Li et al, Single-cell RNA sequencing reveals the landscape of maize root tips and assists in identification of cell type-specific nitrate-response genes, The Crop Journal ... WebTable 1: Maize Genes Studied by Barbara McClintock. Dominant allele on the short arm of chromosome 9 that prevents color from being expressed in the aleurone layer of the maize kernel, causing a ...

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Web1 day ago · Maize (Zea mays) is an important crop plant with distinctive life history characteristics and structural features. Genetic studies have extended our knowledge of maize developmental processes, genetics, and molecular ecophysiology. ... one egg cell, two polar nuclei, two synergids, and three antipodal cells (Randolph 1936; Huang and …

WebJan 7, 2024 · Although single-cell RNA sequencing was successfully used to identify the transcriptomes of vascular cells in Arabidopsis (Kim et al., 2024), the suberin–lignin barrier surrounding the BS of maize leaves prevented access to vascular cell transcriptomes in maize. With our optimized protocol, BSCs were released and could be identified based … WebDec 14, 2024 · The fine-scale resolution of single-cell analysis was used to reconstruct the process of shoot cell differentiation, whereby stem cells acquire diverse and distinct cell fates over...

WebFeb 15, 2024 · We have developed a planta platform of single-nucleus RNA-sequencing by combined fluorescence-activated nuclei flow sorting, and used it to identify cell types in mature and developing stomata from 33,098 nuclei of the maize epidermis-enriched tissues. WebDec 14, 2024 · These single-cell transcriptomic analyses of the shoot apex yield insight into the processes of stem-cell function and cell-fate acquisition in the maize …

WebApr 6, 2024 · Here, we present a single-cell RNA (scRNA) sequencing and chromatin accessibility survey of rice radicles. By temporal profiling of individual root tip cells we reconstruct continuous...

WebJan 13, 2024 · A single-cell-resolution map of the maize root meristem, consisting of 14,775 high-quality sequenced cells, identified 21 cell clusters, which were then spatially … farm dining room table and chairsWebOct 11, 2024 · Implementing single cell RNA-seq of maize leaf protoplasts transiently expressing anther transcription factors is a new approach to organizing regulatory hierarchies for maize somatic anther cells 10.1111/tpj.16045. 2 new studies on 24-nt phasiRNA Two published studies established new aspects of 24-nt phasiRNA biology. farm direct food latin americaWebSep 27, 2024 · We describe 92 distinct states of chromatin accessibility across more than 165,913 putative CREs, 56,575 cells, and 52 known cell-types in maize using a novel implementation of regularized ... farm direct hempWebMaize brown midrib (bm) mutants associated with impaired lignin biosynthesis are a potential source for the breed of novel germplasms with improved cell wall digestibility. ... Furthermore, five 4CLs were retrieved from maize genome, and Zm4CL1 was the most highly expressed one in the lignified tissues. Mutation of Zm4CL1 mainly impeded the ... free online horse games for tabletWebPubMed free online horror movieWebJan 13, 2024 · A single-cell-resolution map of the maize root meristem, consisting of 14,775 high-quality sequenced cells, identified 21 cell clusters, which were then spatially mapped back to the... farm direct marketing albertaWebSep 28, 2024 · We describe 92 distinct states of chromatin accessibility across more than 165,913 putative CREs, 56,575 cells, and 52 known cell-types in maize using a novel implementation of regularized quasibinomial logistic regression. free online horse games free